Luo ML, Jackson RN, Denny SR, Tokmina-Lukaszewska M, Maksimchuk KR, Lin W, Bothner B, Wiedenheft B, Beisel CL. The CRISPR RNA-guided surveillance complex in Escherichia coli accommodates extended RNA spacers. Nucleic Acids Res. 2016 May 12. pii: gkw421. [Epub ahead of print] PubMed PMID: 27174938.

Streit BR, Kant R, Tokmina-Lukaszewska M, Celis AI, Machovina MM, Skaar EP, Bothner B, DuBois JL. Time-resolved Studies of IsdG Protein Identify Molecular Signposts along the Non-canonical Heme Oxygenase Pathway. J Biol Chem. 2016 Jan 8;291(2):862-71. doi: 10.1074/jbc.M115.666560. Epub 2015 Nov 3. PubMed PMID: 26534961; PubMed Central PMCID: PMC4705404.

Hamerly T, Tripet B, Wurch L, Hettich RL, Podar M, Bothner B, Copié V. Characterization of Fatty Acids in Crenarchaeota by GC-MS and NMR. Archaea. 2015  Dec 31;2015:472726. doi: 10.1155/2015/472726. eCollection 2015. PubMed PMID: 26880868; PubMed Central PMCID: PMC4736080.

Selzer L, Kant R, Wang JC, Bothner B, Zlotnick A. Hepatitis B Virus Core Protein Phosphorylation Sites Affect Capsid Stability and Transient Exposure of the C-terminal Domain. J Biol Chem. 2015 Nov 20;290(47):28584-93. doi: 10.1074/jbc.M115.678441. Epub 2015 Sep 24. PubMed PMID: 26405031; PubMed Central  PMCID: PMC4653712.

Zignego DL, Hilmer JK, June RK. Mechanotransduction in primary human osteoarthritic chondrocytes is mediated by metabolism of energy, lipids, and amino acids. J Biomech. 2015 Dec 16;48(16):4253-61. doi: 10.1016/j.jbiomech.2015.10.038. Epub 2015 Oct 31. PubMed PMID: 26573901.

Hamerly T, Tripet BP, Tigges M, Giannone RJ, Wurch L, Hettich RL, Podar M, Copié V, Bothner B. Untargeted metabolomics studies employing NMR and LC-MS reveal metabolic coupling between Nanoarcheum equitans and its archaeal host Ignicoccus hospitalis. Metabolomics. 2015 Aug 1;11(4):895-907. PubMed PMID: 26273237; PubMed Central PMCID: PMC4529127.

Heinemann J, Noon B, Mohigmi MJ, Mazurie A, Dickensheets DL, Bothner B. Real-time digitization of metabolomics patterns from a living system using mass spectrometry. J Am Soc Mass Spectrom. 2014 Oct;25(10):1755-62. doi: 10.1007/s13361-014-0922-z. Epub 2014 Jul 8. PubMed PMID: 25001378; PubMed Central PMCID: PMC4163111.

Hamerly T, Heinemann J, Tokmina-Lukaszewska M, Lusczek ER, Mulier KE, Beilman  GJ, Bothner B. Bovine serum albumin as a molecular sensor for the discrimination  of complex metabolite samples. Anal Chim Acta. 2014 Mar 25;818:61-6. doi: 10.1016/j.aca.2014.01.058. Epub 2014 Feb 8. PubMed PMID: 24626404.

Jutila AA, Zignego DL, Hwang BK, Hilmer JK, Hamerly T, Minor CA, Walk ST, June RK. Candidate mediators of chondrocyte mechanotransduction via targeted and untargeted metabolomic measurements. Arch Biochem Biophys. 2014 Mar 1;545:116-23. doi: 10.1016/ Epub 2014 Jan 16. PubMed PMID: 24440608; PubMed Central PMCID: PMC3967962.

Reeves BD, Joshi N, Campanello GC, Hilmer JK, Chetia L, Vance JA, Reinschmidt  JN, Miller CG, Giedroc DP, Dratz EA, Singel DJ, Grieco PA. Conversion of S-phenylsulfonylcysteine residues to mixed disulfides at pH 4.0: utility in protein thiol blocking and in protein-S nitrosothiol detection. Org Biomol Chem. 2014 Oct 28;12(40):7942-56. doi: 10.1039/c4ob00995a. Epub 2014 Jul 2. PubMed PMID: 24986430; PubMed Central PMCID: PMC4365953.

Valenzuela J, Carlson RP, Gerlach R, Cooksey K, Peyton BM, Bothner B, Fields MW. Nutrient resupplementation arrests bio-oil accumulation in Phaeodactylum tricornutum. Appl Microbiol Biotechnol. 2013 Aug;97(15):7049-59. doi: 10.1007/s00253-013-5010-y. Epub 2013 Jun 15. PubMed PMID: 23771779; PubMed Central PMCID: PMC3708285.

Shipman M, Lubick K, Fouchard D, Gurram R, Grieco P, Jutila M, Dratz EA. Proteomic and systems biology analysis of the monocyte response to Coxiella burnetii infection. PLoS One. 2013 Aug 21;8(8):e69558. doi: 10.1371/journal.pone.0069558. eCollection 2013. PubMed PMID: 23990884; PubMed Central PMCID: PMC3749201.

Epstein MG, Reeves BD, Maaty WS, Fouchard D, Dratz EA, Bothner B, Grieco PA. Enhanced sensitivity employing zwitterionic and pI balancing dyes (Z-CyDyes) optimized for 2D-gel electrophoresis based on side chain modifications of CyDye fluorophores. New tools for use in proteomics and diagnostics. Bioconjug Chem. 2013 Sep 18;24(9):1552-61. doi: 10.1021/bc4002213. Epub 2013 Aug 13. Erratum in:  Bioconjug Chem. 2014 Apr 16;25(4):824. PubMed PMID: 23941326.

Maaty WS, Steffens JD, Heinemann J, Ortmann AC, Reeves BD, Biswas SK, Dratz EA, Grieco PA, Young MJ, Bothner B. Global analysis of viral infection in an archaeal model system. Front Microbiol. 2012 Dec 10;3:411. doi: 10.3389/fmicb.2012.00411. eCollection 2012. PubMed PMID: 23233852; PubMed Central PMCID: PMC3518317.

Shipman M, Lubick K, Fouchard D, Guram R, Grieco P, Jutila M, Dratz EA. Proteomic and systems biology analysis of monocytes exposed to securinine, a GABA(A) receptor antagonist and immune adjuvant. PLoS One. 2012;7(9):e41278. doi: 10.1371/journal.pone.0041278. Epub 2012 Sep 13. PubMed PMID: 23028424; PubMed Central PMCID: PMC3441550.