Articles

Reynolds GL, Mumey B, Strnadova-Neeley V, Lachowiec J. Hijacking a metagenomics approach for polyploid comparative genomics. Applications in Plant Science. Accepted.

Lachowiec J, Feldman MJ, Matias FI, LeBauer D, Gregory A. 2024. Unoccupied aerial systems adoption in agricultural research. The Plant Phenome Journal. 7, e20098. https://doi.org/10.1002/ppj2.20098 

Ewing P, Kantar M, Killian E, McCormick A, Neyhart J, Sherman J, Williams J, Lachowiec J, Eberly J. 2024. Local adaptation and broad performance are synergistic to productivity in modern barley. Crop Science. 64, 192-199. https://doi.org/10.1002/csc2.21168

Jensen J, Turner H, Lachowiec J, Lutgen G, Yin XS, Sherman J. 2023. Genetic dissection of endosperm hydration in malting barley (Hordeum vulgare). Plant Breeding, 142(5), 639–649. https://doi.org/10.1111/pbr.13138 

Lachowiec J, Berg JE, Liang M, FH Correr. 2023. Historic Trends and Sources of Year-over-Year Stability in Montana. Crop Science. 1-13. https://doi.org/10.1002/csc2.20942 

Interdisciplinary Plant Science Consortium. 2023. Inclusive collaboration across plant physiology and genomics: Now is the time!. Plant Direct, 7(5), e493. https://doi.org/10.1002/pld3.493

Steward KF, Refai M, Dyer W, Copié V, Lachowiec J, Bothner B. 2023. Acute Stress Reduces Population-level Metabolic and Proteomic Variation. BMC Bioinformatics 24, 87. https://doi.org/10.1186/s12859-023-05185-4 

Chorak G, Lachowiec J, Reynolds G, Correr F, Thum R. 2023. Transcriptional responses of Eurasian (Myriophyllum spicatum) and hybrid ( spicatum × M. sibricum ) watermilfoil with differing growth rates to 2,4-D herbicide treatment. Aquatic Botany. https://doi.org/10.1016/j.aquabot.2023.103631 

Turner H, Sherman J, Lachowiec J, Macleod A, Bachman W. 2022. Review of Ethyl Carbamate management in distilling with specific analysis of Glycosidic Nitrile production in North American grown barley varieties. Journal of Distilling Science. 2(1): 8-14.

Alptekin B, Erfatpour M, Mangel D, Pauli D, Blake T, Turner H, Lachowiec J, Sherman J, Fischer A. 2022. Selection of favorable alleles of genes controlling flowering and senescence improves malt barley quality. Molecular Breeding. 42(59). https://doi.org/10.1007/s11032-022-01331-7

Williams JL, Sherman JD, Lamb PE, Cook JP, Lachowiec J, Bourgault M. 2022. Relationships between roots, stay-green, and agronomic performance in barley and wheat grown in semi-arid conditions. The Plant Phenome Journal. 5(1): e220050. https://doi.org/10.1002/ppj2.20050

Matias F, Green A, Lachowiec J, LeBauer D, Feldman M. 2022. Bison-Fly: A UAV pipeline for plant breeding. The Plant Phenome Journal. 5(1):e20048. https://doi.org/10.1002/ppj2.20048

Carr PM, Fordyce SI, Lachowiec J, Bishop S, Fryer H, Dahlhausen S. 2021. Replacing fallow with warm-season annual crops in dryland wheat systems. Agronomy Journal. 113(5):4142-4160. https://doi.org/10.1002/agj2.20809 

Li H, Hu X, Lovell JT, Grabowski PP, Mamidi S, Chen C, Amirebrahimi M, Kahanda I, Mumey B, Barry K, Kudrna D, Schmutz J, Lachowiec J, Lu C. 2021. Genetic dissection of natural variation in oilseed traits of camelina by whole-genome resequencing and QTL mapping. The Plant Genome, 14:2, e20110. https://doi.org/10.1002/tpg2.20110

Fordyce S, Jones CA, Dahlhausen SJ, Lachowiec J, Eberly JO, Sherman JD, McPhee KE, Carr PM. 2020. A simple cultivar suitability index for low-pH agricultural soils. Agricultural and Environmental Letters. 5: e20036. https://doi.org/10.1002/ael2.20036

Alptekin B, Mangel D, Pauli D, Blake T, Lachowiec J, Hoogland T, Fischer A, Sherman J. 2020. Combined effects of a glycine-rich RNA-binding protein and a NAC transcription factor extend grain fill duration and improve malt barley agronomic performance. Theoretical and Applied Genetics. https://doi.org/10.1007/s00122-020-03701-1 

Carr PM, Boss DL, Chen C, Dafoe JM, Eberly JO, Fordyce S, Hydner RM, Fryer HK, Lachowiec JA, Lamb PF, McVay KA. 2020. Warm‐season forage options in Northern Dryland Regions. Agronomy Journal. 2020; 1-15.   https://doi.org/10.1002/agj2.20261

Turner HM, Elmore L, Walling J, Lachowiec J, Mangel D, Fischer A, Sherman J. 2019. Effect of Steeping Regime on Barley Malt Quality and Its Impacts on Breeding Program Selection. Journal of the American Society of Brewing Chemists. 77(4): 267-281.

Burkhardt A, Briar S, Martin JM, Carr PM, Lachowiec J, Zabinski C, Roberts DW, Miller P, Sherman J. 2019. Perennial crop legacy effects on nematode community structure in semi-arid wheat-pea systems. Applied Soils Ecology. https://doi.org/10.1016/j.apsoil.2018.12.020

Kalay G, Lachowiec J, Rosas U, Dome MR, Wittkopp PJ. 2019. Redundant and Cryptic Enhancer Activities of the Drosophila yellow Gene. Genetics. http://www.genetics.org/content/early/2019/03/06/genetics.119.301985

Lachowiec J*, Mason G A, Schultz K, Queitsch C. 2018. Redundancy, Feedback, and Robustness in the Arabidopsis thaliana BZR/BEH Gene Family. Frontiers in Genetics. 9:523.

Fordyce S, Torrion J, Lachowiec J, Miller P, Biddulph B, Carr P. 2018. Field Evidence for Frost-Induced Cross-Stress Tolerance in Canola. Agric. Environ. Lett. 3:180020. doi:10.2134/ael2018.05.0020

Lachowiec J, Shen X, Queitsch C, Carlborg O. A Genome-Wide Association Analysis Reveals Epistatic Cancellation of Additive Genetic Variance for Root Length in Arabidopsis thaliana. PLoS Genetics. 2015. 11 (9), e1005541

Lachowiec J, Lemus T, Borenstein E, Queitsch C. Hsp90 promotes kinase evolution. Molecular Biology and Evolution. 2015. 32 (1): 91-99.

Lachowiec J, Lemus T, Thomas JH, Murphy P, Nemhauser JL, Queitsch C. HSP90 can facilitate the divergence of gene duplicates. Genetics. 2013. 193:1269-1277.

Pavelec DM, Lachowiec J, Duchaine TF, Smith HE, Kennedy S. Requirement for ERI/DICER complex in endogenous RNAi and sperm development in C. elegans. Genetics. 2009. 183:1283–1295.

Guang S, Bochner AF, Pavelec DM, Burkhart KB, Harding S, Lachowiec J, Kennedy S. An Argonaute transports siRNAs from the cytoplasm to the nucleus. Science. 2008. Jul 25;321(5888):537-41.

Reviews

Upton RN, Correr FH, Lile J, Reynolds GL, Falaschi K, Cook JP, Lachowiec J. 2023. Design, execution, and interpretation of plant RNA-seq analyses. Frontiers in Plant Science. 14:1135455. https://doi.org/10.3389/fpls.2023.1135455

Kothari A, Lachowiec J. Roles of Brassinosteroids in Mitigating Heat Stress Damage in Cereal Crops. International Journal of Molecular Sciences. 2021; 22(5):2706. https://doi.org/10.3390/ijms22052706

Lachowiec J, Queitsch C, Kliebenstein D. Molecular mechanisms modulating differential plant developmental robustness. Annals of Botany. 2016. 117 (5), 795-809

Lempe J, Lachowiec J, Sullivan AM, Queitsch C. Molecular mechanisms of robustness in plants. Current Opinion in Plant Biology. 2013. 1:62-69.

Datasets

Killian E, Lachowiec J, Sherman J, Lutgen G, Eberly J. 2023. High resolution aerial imagery of barley over a growing season. Dataset. https://doi.org/10.5061/dryad.bk3j9kdhp